Please use this identifier to cite or link to this item: http://hdl.handle.net/1893/31229
Appears in Collections:Aquaculture Journal Articles
Peer Review Status: Refereed
Title: The role of the gut microbiome in sustainable teleost aquaculture
Author(s): Perry, William Bernard
Lindsay, Elle
Payne, Christopher James
Brodie, Christopher
Kazlauskaite, Raminta
Keywords: teleost
gut
aquaculture
microbiome
review
fish
Issue Date: 13-May-2020
Citation: Perry WB, Lindsay E, Payne CJ, Brodie C & Kazlauskaite R (2020) The role of the gut microbiome in sustainable teleost aquaculture. Proceedings of the Royal Society B: Biological Sciences, 287 (1926), Art. No.: 20200184. https://doi.org/10.1098/rspb.2020.0184
Abstract: As the most diverse vertebrate group and a major component of a growing global aquaculture industry, teleosts continue to attract significant scientific attention. The growth in global aquaculture, driven by declines in wild stocks, has provided additional empirical demand, and thus opportunities, to explore teleost diversity. Among key developments is the recent growth in microbiome exploration, facilitated by advances in high-throughput sequencing technologies. Here, we consider studies on teleost gut microbiomes in the context of sustainable aquaculture, which we have discussed in four themes: diet, immunity, artificial selection and closed-loop systems. We demonstrate the influence aquaculture has had on gut microbiome research, while also providing a road map for the main deterministic forces that influence the gut microbiome, with topical applications to aquaculture. Functional significance is considered within an aquaculture context with reference to impacts on nutrition and immunity. Finally, we identify key knowledge gaps, both methodological and conceptual, and propose promising applications of gut microbiome manipulation to aquaculture, and future priorities in microbiome research. These include insect-based feeds, vaccination, mechanism of pro- and prebiotics, artificial selection on the hologenome, in-water bacteriophages in recirculating aquaculture systems (RAS), physiochemical properties of water and dysbiosis as a biomarker.
DOI Link: 10.1098/rspb.2020.0184
Rights: © 2020 The Authors. http://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
Licence URL(s): http://creativecommons.org/licenses/by/4.0/

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