Please use this identifier to cite or link to this item: http://hdl.handle.net/1893/34256
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dc.contributor.authorCorrochano-Fraile, Anaen_UK
dc.contributor.authorDavie, Andrewen_UK
dc.contributor.authorCarboni, Stefanoen_UK
dc.contributor.authorBekaert, Michaëlen_UK
dc.date.accessioned2022-05-05T00:03:07Z-
dc.date.available2022-05-05T00:03:07Z-
dc.date.issued2022en_UK
dc.identifier.other340en_UK
dc.identifier.urihttp://hdl.handle.net/1893/34256-
dc.description.abstractBackground Molluscs remain one significantly under-represented taxa amongst available genomic resources, despite being the second-largest animal phylum and the recent advances in genomes sequencing technologies and genome assembly techniques. With the present work, we want to contribute to the growing efforts by filling this gap, presenting a new high-quality reference genome for Mytilus edulis and investigating the evolutionary history within the Mytilidae family, in relation to other species in the class Bivalvia. Results Here we present, for the first time, the discovery of multiple whole genome duplication events in the Mytilidae family and, more generally, in the class Bivalvia. In addition, the calculation of evolution rates for three species of the Mytilinae subfamily sheds new light onto the taxa evolution and highlights key orthologs of interest for the study of Mytilus species divergences. Conclusions The reference genome presented here will enable the correct identification of molecular markers for evolutionary, population genetics, and conservation studies. Mytilidae have the capability to become a model shellfish for climate change adaptation using genome-enabled systems biology and multi-disciplinary studies of interactions between abiotic stressors, pathogen attacks, and aquaculture practises.en_UK
dc.language.isoenen_UK
dc.publisherSpringer Science and Business Media LLCen_UK
dc.relationCorrochano-Fraile A, Davie A, Carboni S & Bekaert M (2022) Evidence of multiple genome duplication events in Mytilus evolution. BMC Genomics, 23 (1), Art. No.: 340. https://doi.org/10.1186/s12864-022-08575-9en_UK
dc.rightsThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.en_UK
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/en_UK
dc.subjectMytilus edulisen_UK
dc.subjectWhole-genome duplicationen_UK
dc.subjectEvolutionen_UK
dc.subjectPositive selectionen_UK
dc.subjectPaleogenomicsen_UK
dc.titleEvidence of multiple genome duplication events in Mytilus evolutionen_UK
dc.typeJournal Articleen_UK
dc.identifier.doi10.1186/s12864-022-08575-9en_UK
dc.identifier.pmid35501689en_UK
dc.citation.jtitleBMC Genomicsen_UK
dc.citation.issn1471-2164en_UK
dc.citation.volume23en_UK
dc.citation.issue1en_UK
dc.citation.publicationstatusPublisheden_UK
dc.citation.peerreviewedRefereeden_UK
dc.type.statusVoR - Version of Recorden_UK
dc.contributor.funderFishmongers' Companyen_UK
dc.contributor.funderAssociation of Scottish Shellfish Growersen_UK
dc.contributor.funderSustainable Aquaculture Innovation Centreen_UK
dc.contributor.funderNatural Environment Research Councilen_UK
dc.citation.date02/05/2022en_UK
dc.contributor.affiliationInstitute of Aquacultureen_UK
dc.contributor.affiliationInstitute of Aquacultureen_UK
dc.contributor.affiliationInstitute of Aquacultureen_UK
dc.contributor.affiliationInstitute of Aquacultureen_UK
dc.identifier.isiWOS:000789848100001en_UK
dc.identifier.scopusid2-s2.0-85129291308en_UK
dc.identifier.wtid1813239en_UK
dc.contributor.orcid0000-0002-9524-618Xen_UK
dc.contributor.orcid0000-0002-1302-1068en_UK
dc.contributor.orcid0000-0002-1206-7654en_UK
dc.date.accepted2022-04-20en_UK
dcterms.dateAccepted2022-04-20en_UK
dc.date.filedepositdate2022-05-04en_UK
rioxxterms.apcpaiden_UK
rioxxterms.typeJournal Article/Reviewen_UK
rioxxterms.versionVoRen_UK
local.rioxx.authorCorrochano-Fraile, Ana|en_UK
local.rioxx.authorDavie, Andrew|0000-0002-9524-618Xen_UK
local.rioxx.authorCarboni, Stefano|0000-0002-1302-1068en_UK
local.rioxx.authorBekaert, Michaël|0000-0002-1206-7654en_UK
local.rioxx.projectProject ID unknown|Natural Environment Research Council|http://dx.doi.org/10.13039/501100000270en_UK
local.rioxx.freetoreaddate2022-05-04en_UK
local.rioxx.licencehttp://creativecommons.org/licenses/by/4.0/|2022-05-04|en_UK
local.rioxx.filenames12864-022-08575-9.pdfen_UK
local.rioxx.filecount1en_UK
local.rioxx.source1471-2164en_UK
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