Please use this identifier to cite or link to this item: http://hdl.handle.net/1893/23347
Appears in Collections:Aquaculture Journal Articles
Peer Review Status: Refereed
Title: Development of SNP and microsatellite markers for goldsinny wrasse (Ctenolabrus rupestris) from ddRAD sequencing data
Authors: Jansson, Eva
Taggart, John
Wehner, Stefanie
Dahle, Geir
Quintela, Maria
Mortensen, Stein
Kvamme, Bjorn Olav
Glover, Kevin A
Contact Email: j.b.taggart@stir.ac.uk
Keywords: SNP
Microsatellite
Goldsinny wrasse
Ctenolabrus rupestris
Cleaner fish
Issue Date: Sep-2016
Publisher: Springer
Citation: Jansson E, Taggart J, Wehner S, Dahle G, Quintela M, Mortensen S, Kvamme BO & Glover KA (2016) Development of SNP and microsatellite markers for goldsinny wrasse (Ctenolabrus rupestris) from ddRAD sequencing data, Conservation Genetics Resources, 8 (3), pp. 201-206.
Abstract: Wrasse (Labridae) species have been used as parasite cleaners in Atlantic salmon farming since the 1980s. However, their use has recently escalated, with millions now being introduced into salmon cages each year. Most fish are of wild origin, their exploitation potentially impacting native populations. Genetic information is urgently required to inform management decisions. We identified 174 microsatellite and 149 SNP markers from ddRAD sequence data. From these, 17 and 48 microsatellite and SNP markers, respectively, were validated by genotyping 150 goldsinny wrasse collected from five locations along the Norwegian and Swedish coasts. Two to 30 alleles were identified at the microsatellite loci, while gene diversity (He) ranged 0.101–0.907. All SNP loci were biallelic, with averagedHeper locus ranging between 0.063 and 0.495.
Type: Journal Article
URI: http://hdl.handle.net/1893/23347
DOI Link: http://dx.doi.org/10.1007/s12686-016-0532-0
Rights: This item has been embargoed for a period. During the embargo please use the Request a Copy feature at the foot of the Repository record to request a copy directly from the author. You can only request a copy if you wish to use this work for your own research or private study. Publisher policy allows this work to be made available in this repository; Published in Conservation Genetics Resources, September 2016, Volume 8, Issue 3, pp 201–206. The final publication is available at Springer via http://doi.org/10.1007/s12686-016-0532-0
Affiliation: Institute of Marine Research (IMR)
Aquaculture
Aquaculture
Institute of Marine Research (IMR)
Institute of Marine Research (IMR)
Institute of Marine Research (IMR)
Institute of Marine Research (IMR)
Institute of Marine Research (IMR)

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